DatasetSet_04_transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls
#transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls
#transDMproB_versus_transDMpreB_repos
Phenotypephenotype_transDMproB_versus_transDMpreB.cls#transDMproB_versus_transDMpreB_repos
Upregulated in classtransDMproB
GeneSetNCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY
Enrichment Score (ES)0.59244365
Normalized Enrichment Score (NES)1.484425
Nominal p-value0.0
FDR q-value0.42384768
FWER p-Value0.999
Table: GSEA Results Summary



Fig 1: Enrichment plot: NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GRB720673229.6000.0608Yes
2LCK15746279.2830.1205Yes
3PRKRA357448.6900.1757Yes
4GNA1519671817.8800.2246Yes
5STAT13936 55241736.7410.2632Yes
6GAB1188282805.8250.2950Yes
7VEGFA229695604.1310.3066Yes
8MAPK11642 111676463.7550.3262Yes
9PTEN53056613.6940.3493Yes
10STAT35525 99066813.6420.3718Yes
11RIPK153817353.4560.3912Yes
12SGPL1197577873.2700.4096Yes
13STAT5A206648243.1800.4281Yes
14MAPK14233138283.1760.4485Yes
15CXCR4138448333.1610.4687Yes
16AKT313739 9829082.9850.4839Yes
17CASP886949192.9660.5025Yes
18RASA1101749292.9290.5209Yes
19NCK2944810182.6950.5336Yes
20JUN1583212032.3020.5385Yes
21CTSD2213232.0990.5456Yes
22PRKCD2189713322.0740.5586Yes
23MAP4K41124113412.0600.5714Yes
24NFKB11516013931.9650.5813Yes
25BAD2400014201.9380.5924Yes
26SLC9A3R11125016791.5950.5888No
27RAC11630219221.2650.5839No
28RELA2378322800.9560.5707No
29GNA132061724020.8500.5697No
30MAP3K12134824040.8490.5751No
31EGF1516925020.7780.5749No
32GRB22014926330.6750.5722No
33PAK1952727760.5680.5682No
34ITGAV493129230.4910.5635No
35SHB1049329620.4690.5645No
36MYC22465 943530810.4190.5608No
37FOS2120232000.3600.5567No
38FYN3375 3395 2005232060.3590.5588No
39PAWR19885 65832210.3540.5603No
40GNA12902332580.3380.5606No
41FLT13483 1628737160.2070.5372No
42PDGFRB2353938090.1890.5334No
43SPHK15484 1266 140238340.1830.5333No
44ABL12693 4301 279438470.1810.5338No
45CSK880538530.1800.5347No
46PDGFA523738980.1700.5334No
47SMPD118145 265842630.1140.5145No
48TRAF21465742970.1110.5134No
49FGR472343530.1050.5111No
50GNA142390744440.0970.5069No
51TNF2300445720.0870.5006No
52SNX1523993 376146890.0790.4948No
53MAPK36458 1117048190.0710.4883No
54SHC19813 9812 543049280.0660.4829No
55PIK3R1317051080.0590.4736No
56HCK1478752140.0560.4683No
57SOS1547656420.0430.4455No
58PIK3CA956257290.0400.4411No
59STAT5B2022259830.0350.4276No
60GNAO14785 382959920.0340.4274No
61PLCB2526261660.0310.4183No
62SPHK21217 1806 1215561940.0300.4170No
63PDGFB22199 231164900.0250.4012No
64PTPN115326 16391 966065130.0240.4002No
65CDC424503 8722 4504 246567750.0200.3862No
66PTGS25317 965569450.0180.3772No
67CRADD1964070460.0160.3719No
68DOK117104 1018 117770810.0150.3702No
69KDR1650974770.0100.3489No
70LYN1628176050.0080.3421No
71GNAZ7176980.0070.3371No
72YES1593077880.0050.3323No
73HIF1A485080510.0020.3182No
74IRS149258350-0.0020.3021No
75MAP2K4204059480-0.0160.2412No
76GNAI190249647-0.0180.2323No
77GNAI31519810128-0.0250.2065No
78SRC550710226-0.0260.2015No
79AIFM12558 2416110451-0.0300.1895No
80PLCG11475310828-0.0360.1694No
81LRP1928411154-0.0420.1521No
82NCK19447 515211287-0.0440.1453No
83PTPN22341411514-0.0490.1334No
84CDH51851211549-0.0500.1319No
85VAV25848 267011856-0.0570.1157No
86GRB10479912295-0.0700.0925No
87GNAQ4786 23909 368512422-0.0730.0861No
88ACP1431712942-0.0930.0587No
89AKT1856813376-0.1140.0360No
90DNM24635 310313648-0.1330.0222No
91RHOA8624 4409 441013936-0.1580.0077No
92BCAR11874114108-0.174-0.0004No
93JAK223893 9197 370614224-0.188-0.0054No
94SLC9A3R223089 1544 151414485-0.223-0.0180No
95BCL28651 3928 13864 4435 981 4062 13863 402714565-0.235-0.0208No
96IGF13352 9156 340914748-0.264-0.0289No
97TNFRSF1A1181 1020614854-0.284-0.0328No
98CBL1915415001-0.315-0.0386No
99RAF11703515103-0.349-0.0418No
100PTPRJ966415136-0.360-0.0412No
101SMPD31875715556-0.509-0.0606No
102BLK3205 2179115569-0.514-0.0579No
103MAPK8645915940-0.722-0.0733No
104MAP2K11908215996-0.765-0.0713No
105ITGB32063116124-0.865-0.0726No
106PRKCZ526016150-0.885-0.0682No
107HRAS486816218-0.935-0.0658No
108BID17017 43516317-1.001-0.0647No
109ASAH13835 3853 863016338-1.010-0.0592No
110BIRC31924716463-1.108-0.0588No
111MAP2K21993316752-1.439-0.0651No
112GNA113300 3345 1967016806-1.493-0.0583No
113NFKBIA2106517327-2.139-0.0726No
114BAG4743117677-2.813-0.0733No
115SGPP12103917699-2.866-0.0560No
116FADD17536 8950 471117783-3.047-0.0408No
117BAX1783218024-3.718-0.0298No
118CYCS882118295-4.703-0.0140No
119PTPN1532518317-4.8530.0162No
Table: GSEA details [plain text format]



Fig 2: NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY: Random ES distribution   
Gene set null distribution of ES for NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY